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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46265542_46265950_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
46265542 - 46265950

Intron Length:
409

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAATCATA

5'SS Class:
major

3'SS Sequence:
AATCCCTTGCCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
ATATTTCTAATC

Flanking Amino Acid:
PCTWCAPGQKREASLSMENF

Intron Amino Acid Position:
18

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.7
0.54
1.1
71.2
40.5

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
66.4
0.37
1
58.5
42.1

Minor 5ss
43.5
-0.7
2.9
58.6
45.7

Minor BPS
55.8
0.16
1.6
65.7
33.7

Associated Gene:

Gene:
ULK4

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46089305 - 46266003
176699

46035045 - 46266003
230959