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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46338336_46367646_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46338336 - 46367646

Intron Length:

29311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

TATCTTCTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTCGTCTTATCT

Flanking Amino Acid:

EQIEETLKYFLLCAERVGQM

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.3

65.4

42.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

81.8

0.72

0.8

76.3

31.9

Minor 5ss

35.4

-1.7

2.9

45.7

42.5

Minor BPS

62.4

0.47

1.7

78.81

43.9

Associated Gene:

Gene:

TRAK1

Ensembl Gene ID:

ENSAPLG00000013951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047177

46322453 - 46398602

76150

ENSAPLT00000045081

46301702 - 46402539

100838

ENSAPLT00000044650

46308279 - 46402539

94261