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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46359012_46367646_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46359012 - 46367646

Intron Length:

8635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTTTT

5'SS Class:

major

3'SS Sequence:

TATCTTCTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTCGTCTTATCT

Flanking Amino Acid:

NRQTLDILEEVLCAERVGQM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

80.9

34.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

81.8

0.72

0.8

76.3

31.9

Minor 5ss

45.1

-0.5

3.1

67.5

43.4

Minor BPS

62.4

0.47

1.7

78.81

43.9

Associated Gene:

Gene:

TRAK1

Ensembl Gene ID:

ENSAPLG00000013951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038463

46358912 - 46402539

43628