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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46379754_46380694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46379754 - 46380694

Intron Length:

941

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTGTATGTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATAAT

U12 Branch Point Sequence:

TTTTCTGTATGT

Flanking Amino Acid:

KDAQRQLTAELRELEDKYAE

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.8

1.03

0.7

89.6

22.7

Major BPS

62.9

0.32

1.2

63.9

38.4

Major PPT

75.1

0.57

68.1

42.1

Minor 5ss

32.9

-1.9

2.7

43.2

43.8

Minor BPS

48.8

-0

2.4

79.06

43.7

Associated Gene:

Gene:

TRAK1

Ensembl Gene ID:

ENSAPLG00000013951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044650

46308279 - 46402539

94261

ENSAPLT00000038463

46358912 - 46402539

43628

ENSAPLT00000014567

46350583 - 46402539

51957

ENSAPLT00000047177

46322453 - 46398602

76150

ENSAPLT00000045081

46301702 - 46402539

100838