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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46389904_46397092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46389904 - 46397092

Intron Length:

7189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAAATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

STPVQHTETSVPHPGKCMSQ

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

77.3

0.61

0.9

76.3

Minor 5ss

26.7

-2.7

3.3

38.5

46.6

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

TRAK1

Ensembl Gene ID:

ENSAPLG00000013951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045081

46301702 - 46402539

100838

ENSAPLT00000014567

46350583 - 46402539

51957