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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4643715_4645324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4643715 - 4645324

Intron Length:

1610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

TCGCCTCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TTGCCCTCATCT

Flanking Amino Acid:

FEGDCYIILHSKRTSRGTAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

1.3

77.9

38.6

Major BPS

0.5

1.1

71.2

35.2

Major PPT

77.9

0.63

0.8

Minor 5ss

36.5

-1.5

2.7

41.7

38.2

Minor BPS

57.8

0.32

1.9

78.02

43.9

Associated Gene:

Gene:

VILL

Ensembl Gene ID:

ENSAPLG00000008184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042057

4632575 - 4663135

30561

ENSAPLT00000008524

4640016 - 4663135

23120