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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4645522_4647317_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4645522 - 4647317

Intron Length:

1796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TGTTGCACTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

AACTCTTTATTC

Flanking Amino Acid:

TFQSYFRNGIIYKKGGVASG

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

74.3

36.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

74.4

0.55

0.9

66.5

39.5

Minor 5ss

33.1

-1.9

2.8

41.4

38.2

Minor BPS

56.7

0.19

1.6

61.37

38.6

Associated Gene:

Gene:

VILL

Ensembl Gene ID:

ENSAPLG00000008184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042057

4632575 - 4663135

30561

ENSAPLT00000008524

4640016 - 4663135

23120