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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46470196_46475437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46470196 - 46475437

Intron Length:

5242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

CTTTGCTTACTT

Flanking Amino Acid:

LYGVYQTGIMGNLGSGLLDF

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.7

44.5

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

80.9

0.7

82.9

32.5

Minor 5ss

37.4

-1.4

42.1

44.4

Minor BPS

58.4

0.34

2.1

79.08

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029876

46448569 - 46497459

48891

ENSAPLT00000014829

46448569 - 46496885

48317