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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46475599_46478482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46475599 - 46478482

Intron Length:

2884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAG

U12 Branch Point Sequence:

AAATACTAAGTC

Flanking Amino Acid:

ESLLNDAVTVVLYNVFETFV

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

62.8

0.32

1.5

69.9

35.3

Major PPT

93.5

0.98

0.6

92.1

18.4

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

44.3

-0.4

1.9

52.08

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014829

46448569 - 46496885

48317

ENSAPLT00000029876

46448569 - 46497459

48891