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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4647828_4649158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4647828 - 4649158

Intron Length:

1331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GATCCTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

AATCCCCTGATG

Flanking Amino Acid:

PNCNIAEKSRGLALARSIRD

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

76.7

33.9

Major BPS

0.6

1.2

75.9

36.3

Major PPT

71.3

0.48

65.3

40.7

Minor 5ss

30.1

-2.3

2.5

26.5

Minor BPS

49.6

-0.1

1.7

56.32

38.7

Associated Gene:

Gene:

VILL

Ensembl Gene ID:

ENSAPLG00000008184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042057

4632575 - 4663135

30561

ENSAPLT00000008524

4640016 - 4663135

23120