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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46480634_46482619_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46480634 - 46482619

Intron Length:

1986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCATAA

U12 Branch Point Sequence:

CATTTCTAGACA

Flanking Amino Acid:

LVFISVYRVIGVVIQTWILN

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.4

40.1

Major BPS

0.37

61.3

Major PPT

87.8

0.85

0.7

84.9

29.9

Minor 5ss

31.8

-2.1

3.1

36.7

42.5

Minor BPS

57.1

0.22

1.7

66.29

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029876

46448569 - 46497459

48891

ENSAPLT00000014829

46448569 - 46496885

48317