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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46483758_46485606_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46483758 - 46485606

Intron Length:

1849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

TTTACTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTTTGTGATA

Flanking Amino Acid:

PKLNEKLHGRAFDHILSAIE

Intron Amino Acid Position:

477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.5

36.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

84.4

0.77

0.8

77.5

36.7

Minor 5ss

38.8

-1.3

43.3

Minor BPS

54.2

0.13

72.69

33.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029876

46448569 - 46497459

48891

ENSAPLT00000014829

46448569 - 46496885

48317