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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46488735_46489290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46488735 - 46489290

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TATTCTTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TTGTTTGTATTT

Flanking Amino Acid:

STVESSVSYLLREKAGPVCL

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

74.7

35.4

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

82.3

0.73

0.9

36.2

Minor 5ss

38.9

-1.2

2.8

55.7

41.6

Minor BPS

47.5

-0.1

2.2

70.24

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029876

46448569 - 46497459

48891

ENSAPLT00000014829

46448569 - 46496885

48317