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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4649526_4650367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4649526 - 4650367

Intron Length:

842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAAGAC

5'SS Class:

major

3'SS Sequence:

GGTTTCTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTACATATAT

Flanking Amino Acid:

PLTQDLLQHEDCYILDQGGY

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

0.9

30.5

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

79.7

0.67

0.9

37.2

Minor 5ss

24.6

-2.9

3.2

31.7

42.9

Minor BPS

49.8

0.06

2.1

79.75

41.4

Associated Gene:

Gene:

VILL

Ensembl Gene ID:

ENSAPLG00000008184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042057

4632575 - 4663135

30561

ENSAPLT00000008524

4640016 - 4663135

23120