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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4650467_4652673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4650467 - 4652673

Intron Length:

2207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTACCCCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

CCTTTTCTACCC

Flanking Amino Acid:

EKKAAFTRAVGFIQAKGYSP

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

65.8

0.36

0.9

64.1

32.4

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

46.7

-0.2

1.9

57.44

42.1

Associated Gene:

Gene:

VILL

Ensembl Gene ID:

ENSAPLG00000008184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042057

4632575 - 4663135

30561

ENSAPLT00000008524

4640016 - 4663135

23120