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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4653940_4654560_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4653940 - 4654560

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCACACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TGTTTCTCACAC

Flanking Amino Acid:

MVDDASGDIEVWRIEDLQMQ

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

0.87

0.8

85.6

Major PPT

70.9

0.47

0.9

64.9

36.3

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

-0.1

1.9

64.4

40.9

Associated Gene:

Gene:

VILL

Ensembl Gene ID:

ENSAPLG00000008184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042057

4632575 - 4663135

30561

ENSAPLT00000008524

4640016 - 4663135

23120