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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4654699_4655254_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4654699 - 4655254

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TTCCCCTCATCA

Flanking Amino Acid:

RPHYVLYMWQGRHASVDEIT

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

74.1

38.3

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

79.6

0.67

0.7

73.4

31.6

Minor 5ss

32.1

-2

3.1

40.2

45.9

Minor BPS

55.1

0.16

1.9

69.27

42.8

Associated Gene:

Gene:

VILL

Ensembl Gene ID:

ENSAPLG00000008184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042057

4632575 - 4663135

30561

ENSAPLT00000008524

4640016 - 4663135

23120