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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46578242_46579284_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

46578242 - 46579284

Intron Length:

1043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTACA

5'SS Class:

major

3'SS Sequence:

TACTCGGGGACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTTACTTACTC

Flanking Amino Acid:

SVLPTESGEKKGQNGEDGPT

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.3

73.3

37.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

54.1

0.09

1.2

48.9

43.6

Minor 5ss

37.5

-1.4

2.4

43.2

Minor BPS

66.1

0.49

1.8

79.2

36.3

Associated Gene:

Gene:

COL15A1

Ensembl Gene ID:

ENSAPLG00000014374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046444

46538578 - 46645977

107400

ENSAPLT00000022872

46538672 - 46645977

107306

ENSAPLT00000014995

46538672 - 46645977

107306