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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46578242_46581342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46578242 - 46581342

Intron Length:

3101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTACA

5'SS Class:

major

3'SS Sequence:

CTATCATCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

TTTACTATCATC

Flanking Amino Acid:

SVLPTESGEKGLPGLDGVVG

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.3

73.3

37.4

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

0.5

0.9

65.4

34.9

Minor 5ss

37.5

-1.4

2.4

43.2

Minor BPS

48.6

-0.1

67.67

38.3

Associated Gene:

Gene:

COL15A1

Ensembl Gene ID:

ENSAPLG00000014374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021646

46538672 - 46645977

107306