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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46581397_46584292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46581397 - 46584292

Intron Length:

2896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

VGPPGQKGEKGDRGLPGSIG

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

COL15A1

Ensembl Gene ID:

ENSAPLG00000014374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022872

46538672 - 46645977

107306

ENSAPLT00000021646

46538672 - 46645977

107306

ENSAPLT00000014995

46538672 - 46645977

107306

ENSAPLT00000046444

46538578 - 46645977

107400