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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46589749_46595609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46589749 - 46595609

Intron Length:

5861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGATCTTTGAGC

Flanking Amino Acid:

SRITGSRVPKGERGNIGPPG

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

0.85

0.9

39.9

Major PPT

86.2

0.82

0.8

84.1

30.9

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

59.5

0.28

1.6

66.92

Associated Gene:

Gene:

COL15A1

Ensembl Gene ID:

ENSAPLG00000014374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021646

46538672 - 46645977

107306

ENSAPLT00000046444

46538578 - 46645977

107400