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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46589749_46599377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46589749 - 46599377

Intron Length:

9629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

TTATCTTGAATA

Flanking Amino Acid:

SRITGSRVPKGLPGTKGKPG

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

74.6

0.61

65.6

41.4

Major PPT

0.56

73.4

37.1

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

70.4

0.64

1.3

77.1

33.6

Associated Gene:

Gene:

COL15A1

Ensembl Gene ID:

ENSAPLG00000014374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014995

46538672 - 46645977

107306