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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4659090_4660685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4659090 - 4660685

Intron Length:

1596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TTTTTACCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTCTTTTTACCT

Flanking Amino Acid:

FNAWDPYKWSDGKSYEEMKN

Intron Amino Acid Position:

718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

71.7

40.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

84.5

0.78

0.7

83.1

27.5

Minor 5ss

43.9

-0.7

2.9

59.1

45.4

Minor BPS

60.3

0.4

1.6

74.22

43.6

Associated Gene:

Gene:

VILL

Ensembl Gene ID:

ENSAPLG00000008184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042057

4632575 - 4663135

30561

ENSAPLT00000008524

4640016 - 4663135

23120