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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46595646_46599377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46595646 - 46599377

Intron Length:

3732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

TTATCTTGAATA

Flanking Amino Acid:

RGNIGPPGSKGLPGTKGKPG

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

74.6

0.61

65.6

41.4

Major PPT

0.56

73.4

37.1

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

70.4

0.64

1.3

77.1

33.6

Associated Gene:

Gene:

COL15A1

Ensembl Gene ID:

ENSAPLG00000014374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046444

46538578 - 46645977

107400

ENSAPLT00000022872

46538672 - 46645977

107306

ENSAPLT00000021646

46538672 - 46645977

107306