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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4660755_4661573_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4660755 - 4661573

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCATTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TTTTCCTCCATT

Flanking Amino Acid:

DMSAISEITVDLNNISLSKK

Intron Amino Acid Position:

741

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

68.4

36.9

Major BPS

67.6

0.44

1.2

Major PPT

71.7

0.49

68.1

37.2

Minor 5ss

27.7

-2.6

31.6

37.6

Minor BPS

65.7

0.57

88.16

37.4

Associated Gene:

Gene:

VILL

Ensembl Gene ID:

ENSAPLG00000008184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042057

4632575 - 4663135

30561

ENSAPLT00000008524

4640016 - 4663135

23120