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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46636524_46640199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46636524 - 46640199

Intron Length:

3676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCAACAT

U12 Branch Point Sequence:

TGACCTTCAACA

Flanking Amino Acid:

PPGPPAIYGSASAMPGPPGP

Intron Amino Acid Position:

875

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

58.4

0.21

1.2

65.6

39.7

Major PPT

82.4

0.73

0.9

81.2

36.5

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

59.3

0.29

1.5

67.25

38.5

Associated Gene:

Gene:

COL15A1

Ensembl Gene ID:

ENSAPLG00000014374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022872

46538672 - 46645977

107306

ENSAPLT00000021646

46538672 - 46645977

107306

ENSAPLT00000014995

46538672 - 46645977

107306

ENSAPLT00000046444

46538578 - 46645977

107400