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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46640265_46641399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46640265 - 46641399

Intron Length:

1135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTACTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TGCTACTTGACA

Flanking Amino Acid:

EPGPPVSRNLITTFQNIAGM

Intron Amino Acid Position:

897

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

69.6

36.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

69.4

0.44

64.5

41.2

Minor 5ss

31.4

-2.1

3.1

36.2

41.7

Minor BPS

66.2

0.5

1.5

72.43

39.2

Associated Gene:

Gene:

COL15A1

Ensembl Gene ID:

ENSAPLG00000014374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014995

46538672 - 46645977

107306

ENSAPLT00000046444

46538578 - 46645977

107400

ENSAPLT00000022872

46538672 - 46645977

107306

ENSAPLT00000021646

46538672 - 46645977

107306