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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46645419_46645760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46645419 - 46645760

Intron Length:

342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CATTACTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTCAGCAAAT

Flanking Amino Acid:

DGRNVMTDPSWPQKVMWHGS

Intron Amino Acid Position:

1080

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

81.9

26.2

Major BPS

0.65

1.5

85.7

34.9

Major PPT

0.7

0.9

77.3

36.3

Minor 5ss

38.5

-1.3

2.9

45.9

43.7

Minor BPS

47.5

-0.1

2.5

79.14

42.4

Associated Gene:

Gene:

COL15A1

Ensembl Gene ID:

ENSAPLG00000014374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014995

46538672 - 46645977

107306

ENSAPLT00000046444

46538578 - 46645977

107400

ENSAPLT00000022872

46538672 - 46645977

107306

ENSAPLT00000021646

46538672 - 46645977

107306