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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46656517_46662158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46656517 - 46662158

Intron Length:

5642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGTC

5'SS Class:

major

3'SS Sequence:

TTTCTCCATACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATTAT

U12 Branch Point Sequence:

TTTTTCTCCATA

Flanking Amino Acid:

AAALLFPAAAALQCYCHLCT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

Major BPS

63.3

0.33

1.1

41.2

Major PPT

82.6

0.73

0.8

77.4

30.3

Minor 5ss

35.9

-1.6

3.5

50.6

46.1

Minor BPS

56.5

0.2

74.85

37.3

Associated Gene:

Gene:

TGFBR1

Ensembl Gene ID:

ENSAPLG00000009967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010387

46656438 - 46684803

28366