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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4667302_4667681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4667302 - 4667681

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAA

U12 Branch Point Sequence:

CGCTCTCCATCT

Flanking Amino Acid:

YTLPFTSLKQGYRHIHLLTK

Intron Amino Acid Position:

750

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

71.3

37.2

Major BPS

59.8

0.24

1.2

61.9

33.9

Major PPT

78.8

0.65

0.9

69.2

41.8

Minor 5ss

-2.1

3.3

42.6

44.4

Minor BPS

42.3

-0.5

57.23

45.5

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023534

4667210 - 4718047

50838

ENSAPLT00000007635

4667210 - 4710060

42851