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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4667832_4669700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4667832 - 4669700

Intron Length:

1869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGGTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CAGCTCTGATCT

Flanking Amino Acid:

KKQTRVIENNGFNPKWEEEF

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

77.3

37.9

Major BPS

0.72

38.9

Major PPT

70.3

0.46

68.5

42.1

Minor 5ss

35.6

-1.6

3.8

56.2

Minor BPS

46.5

-0.1

1.7

59.04

43.9

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023534

4667210 - 4718047

50838

ENSAPLT00000007635

4667210 - 4710060

42851