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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4669834_4670361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4669834 - 4670361

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

GTTTCCTCCACA

Flanking Amino Acid:

WGTKKKLLLKIISGQQLPKV

Intron Amino Acid Position:

656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

83.6

27.5

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

0.65

0.8

72.8

32.1

Minor 5ss

38.8

-1.3

3.1

49.9

40.5

Minor BPS

61.8

0.36

76.68

40.2

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023534

4667210 - 4718047

50838

ENSAPLT00000007635

4667210 - 4710060

42851