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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4670541_4671693_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4670541 - 4671693

Intron Length:

1153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGGTGCA

5'SS Class:

major

3'SS Sequence:

GTTTATGTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTATCTGAAAG

Flanking Amino Acid:

IDLWNVGCQIVALNFQTAGT

Intron Amino Acid Position:

596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

62.4

38.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

79.6

0.67

73.2

41.7

Minor 5ss

26.6

-2.7

3.2

32.2

42.4

Minor BPS

57.4

0.09

1.7

66.36

40.8

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023534

4667210 - 4718047

50838

ENSAPLT00000007635

4667210 - 4710060

42851