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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4671811_4672097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4671811 - 4672097

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

TTTTTCCTGAAG

Flanking Amino Acid:

SKALKLAQESGNSFIHHNIR

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

34.8

Major BPS

0.3

34.1

Major PPT

81.8

0.72

0.9

24.6

Minor 5ss

38.4

-1.3

47.8

43.1

Minor BPS

54.5

-0

1.9

68.2

39.1

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007635

4667210 - 4710060

42851

ENSAPLT00000023534

4667210 - 4718047

50838