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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4672255_4673600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4672255 - 4673600

Intron Length:

1346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAGAA

U12 Branch Point Sequence:

CTCCCCACAAAC

Flanking Amino Acid:

VKTKVQQKGKSDTLKLAKEL

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

49.9

-0

1.1

46.7

38.9

Major PPT

81.8

0.72

0.7

80.5

24.9

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

44.9

-0.4

1.9

54.61

42.8

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023534

4667210 - 4718047

50838

ENSAPLT00000007635

4667210 - 4710060

42851