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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4673763_4679252_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4673763 - 4679252

Intron Length:

5490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTGTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ATTTTGTCCACT

Flanking Amino Acid:

GSKSQFPSPEQLKGKILVKG

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

83.5

0.75

0.8

79.9

32.1

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

45.8

-0.2

2.5

73.91

43.2

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023534

4667210 - 4718047

50838

ENSAPLT00000007635

4667210 - 4710060

42851