Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_46745900_46746778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46745900 - 46746778

Intron Length:

879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

ATTTACTAAATA

Flanking Amino Acid:

ELCLPYLCVPGCKLGEASDF

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.4

34.2

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

72.2

0.5

0.9

65.9

Minor 5ss

30.2

-2.3

3.7

45.9

49.3

Minor BPS

61.6

0.36

1.8

74.71

36.9

Associated Gene:

Gene:

RECK

Ensembl Gene ID:

ENSAPLG00000001299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032521

46706501 - 46761477

54977

ENSAPLT00000001449

46706501 - 46761477

54977