Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_46748661_46749170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46748661 - 46749170

Intron Length:

510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTTC

5'SS Class:

strong_major

3'SS Sequence:

GTTACTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCCTCTTTTATG

Flanking Amino Acid:

SSEDERRKFTGLPCNCVDQF

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

82.3

32.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

83.9

0.76

0.8

80.9

36.6

Minor 5ss

51.2

0.04

2.5

70.2

40.4

Minor BPS

55.4

0.02

1.7

58.34

44.1

Associated Gene:

Gene:

RECK

Ensembl Gene ID:

ENSAPLG00000001299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032521

46706501 - 46761477

54977

ENSAPLT00000001449

46706501 - 46761477

54977