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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46755343_46758852_F


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
46755343 - 46758852

Intron Length:
3510

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTAAAGTTC

5'SS Class:
major

3'SS Sequence:
TGTTTTCTCCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATATCAC

U12 Branch Point Sequence:
TATCACATCATC

Flanking Amino Acid:
DKDKLDNFARVTNKKPITVL

Intron Amino Acid Position:
895

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1.1
67.2
39.2

Major BPS
69.5
0.49
1
71.8
33.3

Major PPT
84.5
0.78
0.8
77.2
37.1

Minor 5ss
40.2
-1.1
3.4
49.9
46.8

Minor BPS
44.4
-0.4
2.1
59.33
39.2

Associated Gene:

Gene:
RECK

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46706501 - 46761477
54977

46706501 - 46761477
54977