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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_46774267_46777986_R

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
46774267 - 46777986
Intron Length:
3720

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAAGCAT
5'SS Class:
strong_major
3'SS Sequence:
TTTTTTTCTTTAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATTTCAT
U12 Branch Point Sequence:
TATTTCATATTT
Flanking Amino Acid:
GLDSCRELLKNLKSFDPGEK
Intron Amino Acid Position:
37

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
80.3
0.72
1
72
39.3
Major BPS
91.2
1.02
0.7
91.7
20.2
Major PPT
92.8
0.96
0.5
93.3
15.6
Minor 5ss
31.8
-2.1
3.5
46.7
48.6
Minor BPS
55.9
0.26
1.8
77.69
38.8

Associated Gene:

Gene:
ADNP2
Ensembl Gene ID:
ENSAPLG00000000865
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000000865
46769725 - 46779334
9610