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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4679403_4680410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4679403 - 4680410

Intron Length:

1008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTGTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

AGTTCACTGATG

Flanking Amino Acid:

IKAIKNYAFKTSPYPVIISL

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

76.2

39.3

Major BPS

72.5

0.56

1.2

63.4

Major PPT

72.6

0.51

0.9

65.3

41.1

Minor 5ss

37.6

-1.4

3.3

41.4

Minor BPS

46.8

-0.3

55.8

39.2

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023534

4667210 - 4718047

50838

ENSAPLT00000007635

4667210 - 4710060

42851