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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46804516_46807763_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46804516 - 46807763

Intron Length:

3248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GTGCCTTTAATA

Flanking Amino Acid:

KDKEAAAVKKVEELLSIADF

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

83.4

28.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

80.1

0.68

0.9

41.3

Minor 5ss

36.3

-1.5

3.3

49.5

46.6

Minor BPS

67.8

0.55

1.2

69.36

37.2

Associated Gene:

Gene:

RBFA

Ensembl Gene ID:

ENSAPLG00000015494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016146

46801952 - 46813433

11482