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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4680556_4682359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4680556 - 4682359

Intron Length:

1804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AGGTTTAAAACC

Flanking Amino Acid:

TGPSSTEAYIRALTKGCRCV

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

73.1

0.58

79.6

29.1

Major PPT

0.85

0.8

80.2

37.3

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

45.2

-0.3

1.8

53.54

38.3

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023534

4667210 - 4718047

50838

ENSAPLT00000007635

4667210 - 4710060

42851