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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46812734_46813014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46812734 - 46813014

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTGCG

5'SS Class:

major

3'SS Sequence:

CTTTTTCCAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

TTTTTCCAAAAG

Flanking Amino Acid:

NLLKKMLHKKKKKFWYDSPA

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

63.7

39.6

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

69.8

0.45

72.4

31.3

Minor 5ss

33.3

-1.9

3.4

40.9

39.7

Minor BPS

48.7

-0.2

2.1

64.91

42.8

Associated Gene:

Gene:

RBFA

Ensembl Gene ID:

ENSAPLG00000015494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016146

46801952 - 46813433

11482