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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4682562_4683562_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4682562 - 4683562

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTTGG

5'SS Class:

strong_major

3'SS Sequence:

ATTTATCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

CAGATTTTAACA

Flanking Amino Acid:

LIQRYEPNELAKKRNAMTKD

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

69.7

43.7

Major BPS

88.7

0.96

0.8

36.5

Major PPT

74.4

0.55

70.3

40.3

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

58.8

0.27

1.3

60.29

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023534

4667210 - 4718047

50838

ENSAPLT00000007635

4667210 - 4710060

42851