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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46838028_46844597_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46838028 - 46844597

Intron Length:

6570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACCCG

5'SS Class:

major

3'SS Sequence:

TTCTTTTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

GCTTTTGTATTT

Flanking Amino Acid:

DEVLYSIAEKVKNFAVIYLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

59.6

45.1

Major BPS

71.4

0.53

67.3

39.3

Major PPT

79.1

0.66

0.8

80.4

31.6

Minor 5ss

37.5

-1.4

3.1

48.4

47.3

Minor BPS

45.2

-0.2

2.1

63.03

42.4

Associated Gene:

Gene:

TXNL4A

Ensembl Gene ID:

ENSAPLG00000015327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015965

46837854 - 46845816

7963