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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46871523_46891659_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46871523 - 46891659

Intron Length:

20137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTGTTTTAATT

Flanking Amino Acid:

IKAPPKRSYLDFDLNYFWHW

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.1

37.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.2

0.72

0.9

Minor 5ss

-0.6

2.5

52.7

Minor BPS

67.3

0.62

1.4

78.3

39.3

Associated Gene:

Gene:

SLC66A2

Ensembl Gene ID:

ENSAPLG00000022311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039813

46858858 - 46908914

50057