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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4688232_4693164_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

4688232 - 4693164

Intron Length:

4933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

CATCATCCTGCAG|T

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

ATTTCCTTACAT

Flanking Amino Acid:

NSMNQKQKLQHWIHTCLRKA

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

56.4

43.4

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

73.6

0.53

0.9

66.1

35.1

Minor 5ss

97.5

1.6

0.6

95.7

13.5

Minor BPS

71.4

0.75

1.7

87.9

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023534

4667210 - 4718047

50838

ENSAPLT00000007635

4667210 - 4710060

42851