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Intron Name: Anas_platyrhynchos_platyrhynchos_2_46891877_46905849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46891877 - 46905849

Intron Length:

13973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGTGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTCTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

CTTGCCATAAAT

Flanking Amino Acid:

NYQNRSTEGMSVKMVLMWTS

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.6

42.2

Major BPS

62.2

0.3

1.1

68.9

Major PPT

0.65

0.8

76.9

31.9

Minor 5ss

37.4

-1.4

3.5

48.2

Minor BPS

58.3

0.34

1.9

78.17

43.8

Associated Gene:

Gene:

SLC66A2

Ensembl Gene ID:

ENSAPLG00000022311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039813

46858858 - 46908914

50057