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Intron Name: Anas_platyrhynchos_platyrhynchos_2_4693394_4705405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4693394 - 4705405

Intron Length:

12012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTCTTTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TTTCTTTCCACA

Flanking Amino Acid:

KMLRSPESQIFSIEDIRDVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

66.3

0.4

1.1

41.8

Major PPT

87.8

0.85

0.6

83.8

24.5

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

-0

1.9

68.33

38.3

Associated Gene:

Gene:

PLCD1

Ensembl Gene ID:

ENSAPLG00000007299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023534

4667210 - 4718047

50838

ENSAPLT00000007635

4667210 - 4710060

42851